shiny.benchmark – How to Measure Performance Improvements in R Shiny Apps
This article is originally published at https://appsilon.com
The shiny.benchmark package by Appsilon allows you to compare the performance of different versions of R Shiny applications. You can write instructions that will be executed and evaluated on different versions of your app and easily measure the performance differences.
In today’s article, you’ll learn how to install and use the
shiny.benchmark package by exploring and tweaking an example Shiny application. So without much ado, let’s dive straight in.
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Table of contents:
- How to install shiny.benchmark
- Benchmarks in action: How to use shiny.benchmark
- Summing up the shiny.benchmark R package
How to install shiny.benchmark
It doesn’t matter which one you opt for, but keep in mind that Cypress requires Node.js and yarn, so make sure to have them installed. If you’re on Linux, Cypress might also require some additional dependencies, so check the documentation link if you’re running into errors.
FYI – Rhino now supports both Cypress and shinytest2.
Assuming you have all the prerequisites out of the way, it’s time to install
shiny.benchmark. Run the following command to install the latest version from GitHub:
And that’s it! Next, let’s see how to use Shiny Benchmark.
Benchmarks in action: How to use shiny.benchmark
The simplest way to see how
shiny.benchmark works is to use the sample app it ships with. The
load_example() function will download the sample R Shiny application to the path you provide:
library(shiny.benchmark) load_example(path = "path/to/your/folder")
Here’s what the app looks like when loaded (and after each button gets pressed):
The heart of this application lies in the
server.R file. It instructs the app to sleep for some time after each button gets clicked. The default values are 1, 0.5, and 0.1 seconds for the first, second, and third buttons, respectively.
We’ll tweak this file later, but first, need to make different versions of the app. Navigate to the
app folder and initialize a new Git repository:
cd app git init
While here, let’s create a
.gitignore file which will contain all files we don’t want to track:
echo .Rproj.user >> .gitignore echo *.Rproj >> .gitignore echo .Rprofile >> .gitignore echo renv >> .gitignore echo .Rprofile >> .gitignore
App Version #1 – The Default App
And now, let’s finally create a couple of versions of our app. The first one (main branch) will contain the app in its stock format – no modifications made to
server.R file. Add all files to the staging area and commit with the following command:
git add . git commit -m "Initial commit"
App Version #2 – Longer Sleep Times
The second version of the app will be identical UI-wise but will include longer sleep times. You only need to modify the
server.R file and change the values in three calls to
Here’s an example of a modified
All that’s left to do is to add this app version to a different Git branch. We’ve named ours
develop, but the naming is completely arbitrary:
git checkout -b develop git add . git commit -m "Longer sleep times"
App Version #3 – Shorter Sleep Times
Now we’ll make the complete opposite of the second version. In this one, the sleep times will be much shorter, as displayed in the image below:
We’ll also commit this version to a dedicated branch –
git checkout -b develop2 git add . git commit -m "Shorter sleep times"
Up next, let’s see how to write tests for
How to Write Tests for shiny.benchmark
Where you’ll put the tests depends on the testing engine you’ll use. We’ll work with
shinytest2 in this article, which means the tests are located in
app/tests/testthat folder. Here’s what one test file contains:
In a nutshell, it instructs how to interact with the app elements and what to expect from them.
You can construct test cases for your Shiny apps in the same way, just make sure to correctly write the input and output IDs.
That’s all we need to run the benchmarks, so let’s do that next.
How to Run Benchmarks with shiny.benchmark
By now, we have three versions of our app committed to dedicated Git branches, and now it’s time to run the benchmarks. Import the R package and declare a list of branch names as shown in the snippet:
library(shiny.benchmark) commit_list <- c("main", "develop", "develop2")
Now onto the benchmark. The
benchmark() function does all the work for you. It can accept many parameters, but we’ll only use a handful:
commit_list– A list of branches on which the benchmark will run
shinytest2_dir– A directory in which the actual tests are located. We’re using
shinytest2instead of Cypress
use_renv– Whether or not you’re using
renvto manage environments. It’s set to
n_rep– The number of times the tests will be replicated. It’s an optional parameter, but a good one to include for more accurate benchmark metrics
You can check which additional parameters are available, but we’ll stick only to these four today:
> out <- benchmark( commit_list = commit_list, shinytest2_dir = "tests", use_renv = FALSE, n_rep = 10 )
Here’s what you’ll see during the benchmark phase (for each branch):
Let’s see what the
out variable contains after the benchmark runs.
Evaluating Benchmark Results
Run the following R code to print the contents of the
Basically, it shows you the performance differences between distinct app versions (branches) and various statistics for each run, such as mean, median, standard deviation, min and max.
Looking at these values in a table format isn’t the best method for drawing conclusions and insights. If you’re more of a visual type, use the
plot() function to inspect the differences visually:
The app version on
develop2 branch seems to have the lowest runtime values which is to be expected, as we manually reduced the function sleep times.
You now know how
shiny.benchmark works, so let’s make a short summary next.
Summing up the shiny.benchmark R package for measuring app performance
Testing different versions of your R Shiny apps is easier than ever. The
shiny.benchmark package is convenient to use because a typical Shiny workflow will include multiple Git branches and unit tests, so running benchmarks won’t take a huge toll on your development time.
We value measuring app performance as crucial when optimizing your code and introducing new features. You want to make sure there are no bottlenecks in your applications and optimize accordingly.
What do you think of the
shiny.benchmark package? Have you already used it to compare the performance of your Shiny apps? Please let us know in the comment section below, or reach out to us on Twitter – @appsilon – we’d love to hear your input.
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