R Weekly 2023-W21 HTTP Testing, ggblend, Handling Dates in R and Excel
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Hello and welcome to this new issue!
This week’s release was curated by Batool Almarzouq, with help from the R Weekly team members and contributors.
Highlight
Insights
R in the Real World
R in Organizations
R in Academia
Correcting selection effects of noisy polygenic scores: an idiot’s guide
A guide to Bayesian proportion tests with R and {brms}: Use R, Stan, and {brms} to calculate differences between categorical proportions in a principled Bayesian way
Resources
Yihui’s Webinar on R Markdown v1 at the ASA Philadelphia Chapter
R Workflow for Reproducible Data Analysis and Reporting Course
New Packages
CRAN
- {ggblend} 0.1.0: Blending and Compositing Algebra for ‘ggplot2’
{tidysynth} 0.2.0: A Tidy Implementation of the Synthetic Control Method
{emBayes} 0.1.0: Robust Bayesian Variable Selection via Expectation-Maximization
{rDEA} 1.2-7: Robust Data Envelopment Analysis (DEA) for R
{randnet} 0.7: Random Network Model Estimation, Selection and Parameter Tuning
{modelfree} 1.2: Model-Free Estimation of a Psychometric Function
{snvecR} 3.7.5: Calculate Earth’s Obliquity and Precession in the Past
{nonLinearDotPlot} 0.5.0: Non Linear Dot Plots
{bcv} 1.0.2: Cross-Validation for the SVD (Bi-Cross-Validation)
{vol2birdR} 1.0.1: Vertical Profiles of Biological Signals in Weather Radar Data
{CSIndicators} 1.0.1: Climate Services’ Indicators Based on Sub-Seasonal to Decadal Predictions
{Bernadette} 1.1.1: Bayesian Inference and Model Selection for Stochastic Epidemics
{Morphoscape} 1.0.2: Computation and Visualization of Adaptive Landscapes
{Certara.NLME8} 1.2.3: Utilities for Certara’s Nonlinear Mixed-Effects Modeling Engine
{BIDistances} 0.0.2: Bioinformatic Distances
{cascadeSelect} 1.0.0: A Cascade Select Input for ‘Shiny’
{volcano3D} 2.0.9: 3D Volcano Plots and Polar Plots for Three-Class Data
{agena.ai} 1.0.0: R Wrapper for ‘agena.ai’ API
{navigation} 0.0.1: Analyze the Impact of Sensor Error Modelling on Navigation Performance
{compindPCA} 0.1.0: Computation of Relative Weights of Variables and Composite Index Values Based on PCA
{OpenRepGrid} 0.1.14: Tools to Analyze Repertory Grid Data
- {wcox} 1.0: Weights to Correct for Outcome Dependent Sampling in Time to Event Data
{validateIt} 1.2.1: Validating Topic Coherence and Topic Labels
{isopleuros} 1.0.0: Ternary Plots
{baldur} 0.0.1: Bayesian Hierarchical Modeling for Label-Free Proteomics
{boostingDEA} 0.1.0: A Boosting Approach to Data Envelopment Analysis
{weatherindices} 0.1.0: Calculate Weather Indices
{denguedatahub} 1.0.4: A Tidy Format Datasets of Dengue by Country
{Tex4exams} 0.1.2: Generating ‘Sweave’ Code for ‘R/exams’ Questions in Mathematics
{jewel} 2.0.0: Graphical Models Estimation from Multiple Sources
- {rchemo} 0.1-1: Dimension Reduction, Regression and Discrimination for Chemometrics
Updated Packages
{mirai} 0.8.7: Minimalist Async Evaluation Framework for R
{scribe} 0.2.0: Command Argument Parsing - diffify
{fuj} 0.1.3: Functions and Utilities for Jordan - diffify
{vivainsights} 0.3.1: Analyze and Visualize Data from ‘Microsoft Viva Insights’ - diffify
{igraph} 1.4.3: Network Analysis and Visualization - diffify
{spant} 2.12.0: MR Spectroscopy Analysis Tools - diffify
{future.tests} 0.7.0: Test Suite for ‘Future API’ Backends - diffify
{TreeBUGS} 1.5.0: Hierarchical Multinomial Processing Tree Modeling - diffify
{aRtsy} 0.2.3: Generative Art with ‘ggplot2’ - diffify
{areaplot} 2.0.0: Plot Stacked Areas and Confidence Bands as Filled Polygons - diffify
{tutorial.helpers} 0.2.5: Helper Functions for Creating Tutorials - diffify
{IsoplotRgui} 5.3: Web Interface to ‘IsoplotR’ - diffify
{bspm} 0.5.2: Bridge to System Package Manager - diffify
{JGR} 1.9-2: Java GUI for R - diffify
{OpenImageR} 1.2.9: An Image Processing Toolkit - diffify
{mlflow} 2.3.2: Interface to ‘MLflow’ - diffify
{modelsummary} 1.4.1: Summary Tables and Plots for Statistical Models and Data: Beautiful, Customizable, and Publication-Ready - diffify
{PlaneGeometry} 1.4.0: Plane Geometry - diffify
{BFS} 0.4.7: Get Data from the Swiss Statistical Office - diffify
{conf} 1.8.1: Visualization and Analysis of Statistical Measures of Confidence - diffify
{EDCimport} 0.3.0: Import Data from EDC Software - diffify
{PlotTools} 0.2.0: Add Continuous Legends to Plots - diffify
{redland} 1.0.17-16.1: RDF Library Bindings in R - diffify
{materialmodifier} 1.2.0: Apply Photo Editing Effects - diffify
{shiny.exe} 0.2.0: Launch a Shiny Application without Opening R or RStudio - diffify
{crosstalkr} 1.0.2: Analysis of Graph-Structured Data with a Focus on Protein-Protein Interaction Networks - diffify
{ottrpal} 1.1.1: Companion Tools for Open-Source Tools for Training Resources (OTTR) - diffify
{DiagrammeR} 1.0.10: Graph/Network Visualization - diffify
{DT} 0.28: A Wrapper of the JavaScript Library ‘DataTables’ - diffify
{hockeystick} 0.7.3: Download and Visualize Essential Climate Change Data - diffify
{gpg} 1.2.9: GNU Privacy Guard for R - diffify
{prolific.api} 0.5.1: A User-Friendly Interface for Accessing the Prolific API - diffify
{drhur} 1.1.0: Learning R with Dr. Hu - diffify
{ausplotsR} 1.2.9: TERN AusPlots Analysis Package - diffify
{basefun} 1.1-4: Infrastructure for Computing with Basis Functions - diffify
{valr} 0.6.8: Genome Interval Arithmetic - diffify
{goeveg} 0.6.4: Functions for Community Data and Ordinations - diffify
{geojsonio} 0.11.1: Convert Data from and to ‘GeoJSON’ or ‘TopoJSON’ - diffify
{graphicalVAR} 0.3.1: Graphical VAR for Experience Sampling Data - diffify
Videos and Podcasts
Yuri Pribish: New approach of visualisation with set of query in human readable way
Posit Connect, Provide Authenticated Access to Your Data Products
Shiny Apps
Tutorials
sp evolution status: examples of migration from retiring packages
Predict the magnitude of #TidyTuesday tornadoes with effect encoding and xgboost
Scheduling Mastodon Posts in R with rtoot and GitHub Actions
R Project Updates
Updates from R Core:
Upcoming Events in 3 Months
Events in 3 Months:
Jobs
💼 Explore Jobs & Gigs Board on RStudio Community 💼
Quotes of the Week
No matter how long I’ve been doing data science, I still get smacked in the face every once in a while.
— Matt Dancho (Business Science) (@mdancho84) May 21, 2023
True story. 🧵 #datascience #rstats pic.twitter.com/AVy6mgUwxf
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